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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900636.1_cds_XP_016450639.1_45070
CDS Infomation

[gene=LOC107775425] [db_xref=GeneID:107775425] [protein=IQ domain-containing protein IQM1-like] [protein_id=XP_016450639.1] [location=complement(join(21308..22069,22318..22419,22516..22755,23277..23364,23460..23548,23631..23696,23778..23892,23980..24455))] [gbkey=CDS]
Sequence

ATGGGAATAACATATTCCTGTCCCTTTGCCAATTTTGATGATTCAGATACTCGGTTCGAA
TCTTATTTAGTGAGAACAATGAGTTTTGGAAATGATGGTACGAGGACCACGTTACATCAT
ATTAATTTCAATGAACAAAATTCTCAGCAGTCAAAAATGCAGAAGTCTCTCAGTTCTGGT
AAGTTGATCCTTGAAGGAACTCTTAGCTATAAAAGGAGGGAATTGGAGGCCGAGATTGGA
CTAAAGACTCCTGCGTTTGATGCGAGTGATAAGACGTCGAATAGATCAGATAGCCTCACG
AGCAGTGAAGAGGTTTCTGAAAATTTGCATAGTATGCCTGACCAGACTACTAACATGCTA
CCATTAGTATATGAGAAACAAAGAGATGAGGCTGCAGTAAAGTTGCAGAAAACGTACAAA
AGTTTTCGTACTCGAAGACGGCTAGCGGATTGTGCTATTCTAGTTGAGCAGAGATGGTGG
AAGGTATTAGATTCTGTTGAACTCAAGCATAGTTCTATATCATTCTTTGACATTCAGAAA
CCCGAAACCGCTTTTTCTCGTTGGTCAAGAGCTTTAACTAGAGCTGCGAAGGTTGGTAAA
GGTTTGTCCAAAGATGAAAAGGCATGTAAGCTTGCTTTACAGCATTGGCTTGAGGCAATT
GATCCTAGACATCGCTATGGTCACAATCTTCAATTTTATTACGCCAAGTGGCTTCAAGCT
GACAGTAAACAACCTTTCTTCTATTGGTTGGACATAGGTGAAGGTAAAGAAGTAAATCTT
GAGAAGTGCCCCAGATCAAAACTTCATCAACAATGCATCAAGTATCTTGGTCCGGTAGAG
AGAGAGGCATATGAAATTGTAATTGTGGGTGGAAAATTCATTTATAAGCAGAGTGGGAGG
CTTCTTGATACGAGGGGAGGTCCTGAAGATACCAAGTGGATCTTTGTGCTAAGCGTGTCG
AAGGACTTGTATATTGGAATGAAGCAAAAAGGCACTTTTCAGCATTCCAGTTTCTTAGCT
GGAGGAGCCACATTATCTGCAGGCAGATTAGTGGTAGAAGATGGTATTCTAAAGGCTGTC
TGGCCGCACAGCGGACATTATCTCCCTACAAAGGAGAATTTTGAAGAATTTATATCATAT
CTTGAGCAACATAACATTGACGTCAGTGTTCTCCAGAAATCCCCGAGTGATGAGGAGAAA
GCACACTTTATTAGGAAGGAAGGTGGTTTTGGCCTTCGTAACAGCTTATCTGCACCAGAT
TTTAGCCAAGCCAATGAAGAGTGCACCACCAAACACTCAAACAAGGAGAAGACTGATTCT
ACTACCAAGTATTGCAAAGATGCAGAAAATTCAGTTCCATTGTCAAGGCGGTCGCAAGGA
TTAAGACCCCAAATTGCGGTCCAAATACCACTAAGGCAAGACGTATTTGAGTTGTTCCCT
AAGGCTGGCCAGCAGGGAGGATCAAAAAACGACACACAGCCTGTGGATACTCCAATAGAT
GGATATGAAACAGCAGAAGAATATTTATCTGATACAGAACTATCAGTTTCAAAGCAGAAT
TTATTTGATGACGAAGATGAAGAAGATTATGAAGAACCTATCCCCACAGAAAAGATAATC
AAGAGAATAAATACACATAGAAGAACGAAGTCATTCCAGTTGGCTCATCAATTGTCTTGT
AGATGGACAACGGGAGCTGGACCTCGGATTGGATGCATGAGGGACTATCCAACAGAGCTC
CAATTTCGCGTTATGGAGGAGGTGTATTTGTCTCCAAGAACTACATCTCCAACTCCACCT
AAATCTGCTCAACGTCATACTCCTACTATCTTTTCTAGAGAAACAACTGAAAGCAAAAGA
CGTCCTGTTTCTGAATCAGCAGCATTCTTTCAATCAACCCCACTTGTAGAAGAGATACAA
AAATATTGTGATCAGTAG

Peptide Sequence

PEP ID

XP_016450639.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM1-like [Nicotiana tabacum]
Sequence

MGITYSCPFANFDDSDTRFESYLVRTMSFGNDGTRTTLHHINFNEQNSQQSKMQKSLSSG
KLILEGTLSYKRRELEAEIGLKTPAFDASDKTSNRSDSLTSSEEVSENLHSMPDQTTNML
PLVYEKQRDEAAVKLQKTYKSFRTRRRLADCAILVEQRWWKVLDSVELKHSSISFFDIQK
PETAFSRWSRALTRAAKVGKGLSKDEKACKLALQHWLEAIDPRHRYGHNLQFYYAKWLQA
DSKQPFFYWLDIGEGKEVNLEKCPRSKLHQQCIKYLGPVEREAYEIVIVGGKFIYKQSGR
LLDTRGGPEDTKWIFVLSVSKDLYIGMKQKGTFQHSSFLAGGATLSAGRLVVEDGILKAV
WPHSGHYLPTKENFEEFISYLEQHNIDVSVLQKSPSDEEKAHFIRKEGGFGLRNSLSAPD
FSQANEECTTKHSNKEKTDSTTKYCKDAENSVPLSRRSQGLRPQIAVQIPLRQDVFELFP
KAGQQGGSKNDTQPVDTPIDGYETAEEYLSDTELSVSKQNLFDDEDEEDYEEPIPTEKII
KRINTHRRTKSFQLAHQLSCRWTTGAGPRIGCMRDYPTELQFRVMEEVYLSPRTTSPTPP
KSAQRHTPTIFSRETTESKRRPVSESAAFFQSTPLVEEIQKYCDQ

Transcript Sequence

Gene sequence data has not been registered.